Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSARRSRLRRVRWLPHQRIVVLKEVDLWAEDCVTEGVDVVAERLWRMRMDASRNGRAQYLAEYLALHVDSSRHYQWLLSNY--GPSLRDVLLTSSLTPFTEERCKGVLRRVLLALDQLHRVSMYVHADVSLGNVLTSPSSCDDVVLGDLESVSPIG--AVPRGCL-GSYLFMAPERLVDGALPLAPHDDIWAFGIVCYNLLTWDVTHPWCALGTESDHSENYWAFLDLMSKAKDVPPCQLLLQSPLSRCSKEALTFVAVCLSWDPACRPSAAELLQHSWMLSP
3A7J Chain:A ((81-275))----------------------------------------------------------YVTKYYGSYLKDTK--LWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHS-EKKIHRDIKAANVLLSEHG--EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY--DSKADIWSLGITAIEL----------ARG-EPPHSELHPMKV-LFLIPKNNPPT---LEGNYSKPLKE---FVEACLNKEPSFRPTAKELLKHKFIL--


General information:
TITO was launched using:
RESULT:

Template: 3A7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 889 3290 3.70 17.31
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 3.70
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.359

(partial model without unconserved sides chains):
PDB file : Tito_3A7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3A7J-query.scw
PDB file : Tito_Scwrl_3A7J.pdb: