Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEGASDKLLREPFRANFKRERSSSYSTERGSPTSPHLRRLRPLPTSSSEGKGAADGDGEEDPHTRRQAEPELFELTPHGGTANTNVRATRFGVEGLRIGRDPSCCDLVLPSNSVSRLHCVLSVLGDDVFVHDNSFNGTFINGRRVGRGRCSVLHPRDTLSFLNPTLEEASRCGFEFAPLPGHSSSAFTAVEGLR-RYELGPVLGQGSLAAVRLGIDRETGAPVAIKLIERGRF---SCEEAAASLHTEIEMMRSMDHPHVVRVVDAFEGSGCVALVMEYVRGGDLFDYIVGRGRNPFTEAEARHLFGQLLEAILYIHGRSIIHCDLKPENVLVDVVRRGSDGEVDTTSASATATTQGVASSALQTDGDAALSVVDDHQAEAKTVSPYDVRLKLADFGSAKYEGGGAGGGMLETTGAATPVYAAPELACFPADGAPPHEITAVVDVWSLGVLLYILCSGTVP------KPPRADAVVA--FN---RSMTHLSVLCKDLIARMMTVDPSQRPSLADVCHHPWLDGLTISGAPDRGALGSKDVLSVTAKLSPSFPEAAKPL
3I6U Chain:A ((159-486))--------------------------------------------------------------------------------------------------------------------------------YIEDHSGNGTFVNTELVGKGKRRPLNNNSEIA-----LSLSRNKVFVFFDLTVDDQSVYP--KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIG------LNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLL------------------------------------------SSQEE-------DCLIKITDFGHSKILG---------------PTYLAPEVLV----AG----YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3I6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1280 -47192 -36.87 -162.73
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -36.87
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.362

(partial model without unconserved sides chains):
PDB file : Tito_3I6U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3I6U-query.scw
PDB file : Tito_Scwrl_3I6U.pdb: