Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIADYSVTKAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGALTEFLAERAAQVMAFEIDHRLVPILADTLRD-FDNVTVVNEDILKVDLAQHIQNFKNPNLPIKVVANLPYYITTPILMHLIESGIPFSEFVVMMQKEVADRISAQPNTKAYGSLSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRKTLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLADALKGQGL
3FYC Chain:A ((2-226))------------------------AQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEP-YANKLKELYNNIEIIWGDALKVDLNKLDFN--------KVVANLPYQISSPITFKLIKRGFDLA--VLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVK-IKPNKGKYHIENENFFDDFLRAIFQHRNKSVRKALIDSSKELNYNKDEMKKILE------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3FYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1070 -52411 -48.98 -233.98
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -48.98
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_3FYC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FYC-query.scw
PDB file : Tito_Scwrl_3FYC.pdb: