Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVAQAIRNIISPKSVIAQYQKIDFSNKGTIPIRHLNIGFDGKEIDIEFYVNNQFATLFFATLSVFLTYGEDLVIETARHHREFIQDPILKQRVTSLIGQEAIHSKLHNEFNDAIKELEYPVDLYRFLGENFFKYVFLKFPQPLKLSLMAGIEHFTAVLAEYMMKHEKNFYYTDDAKSRALWMWHMLEESEHKDIAYDVYQILNGNYPLRATGFLMAFITILGLIPTATLLVPVLRKPKELLTRKFWKDARRGVNLIFSPKDGVFGSTIGQIFDYLRPNFHPNDHDTTQYLEYYKNKLLNEGGAIAPYFVKEFTPPVRAVS
4ETR Chain:A ((19-147))--------------------------------------------------------------------TSKDGEAGFHACAEDLRDPQLKAAMLEQSRDCAAAADE---LERIVLELGGKP-------------------EEAVLNECERGEDVAKHRYQAALE-----K-SLPAEIHQVIERQYQGVLRHHDRVRALRD------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4ETR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 336 -18308 -54.49 -176.04
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.51

3D Compatibility (PKB) : -54.49
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.310

(partial model without unconserved sides chains):
PDB file : Tito_4ETR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ETR-query.scw
PDB file : Tito_Scwrl_4ETR.pdb: