Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHSFVLVVHIILAVLMIALILVQHGKGADAGASFGGGGAATVFGASGSGNF-LTRVTAILTALFFVTSLTLAVFAKKQTTEAYSLK----------TVQTTAPAQTTSPETSPNAPKTGQ
4JFZ Chain:H ((45-138))------------------------GKGLEWVASIATGGHTTYYSDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCTRGYSSTSYAMDYWGQGTLVTVSSASTKGPSVFPLAPSS--


General information:
TITO was launched using:
RESULT:

Template: 4JFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 232 -4701 -20.26 -56.63
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain H : 0.61

3D Compatibility (PKB) : -20.26
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.175

(partial model without unconserved sides chains):
PDB file : Tito_4JFZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JFZ-query.scw
PDB file : Tito_Scwrl_4JFZ.pdb: