Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKKIDGYIKLQVPAGKANPSPPIGPALGQRGVNIMAFCKEFNAATQKVEPGLPIPVVITVYNDKSFTFIMKTPPASILLKKAAGIQKGSSVPNKTKVGKLTRAQLEEIATTKEPDLTGADLDARVRTIAGSARSMGLEVEL
3J0D Chain:G ((1-140))-AKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVE-


General information:
TITO was launched using:
RESULT:

Template: 3J0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 592 -66172 -111.78 -472.66
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain G : 0.91

3D Compatibility (PKB) : -111.78
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.689

(partial model without unconserved sides chains):
PDB file : Tito_3J0D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J0D-query.scw
PDB file : Tito_Scwrl_3J0D.pdb: