Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKLVSIIILLGIAWVAKLSYDMWQISRTVPELQQSLLQSEQQYANLNDQLVALRRQIQNQPSHNSKTTPLATTEVVQTGIAP---TVLIKQKLELIQFAID-QQQFIYAVDHLTQLQQT----LPQYGIAPALQHSLNQALEQDKQAIQQFVLAQN-QRHQLIDDLLQNIDKNIQQALKQPKFEMDQSEAVSWWKKWFRIEKVETPSINLMNRSVVLKEVQLRLLIAEQALNQGKMAEYQNELQTVMQKLNELPDATSQQLKNRIAKVAHLSVVPVPKLSTLGLIGS
4MIE Chain:A ((207-308))-------------------------------------------------------------------TYPRQSAEVRNEGLHDPQLATLTTKKGTVIQVLVHVTAQYGYEVK-LEVIGETGELQLPNYGLGPILRSNANQQTAVEMSWINRFIQAYNTEVQEFIDEVAKS----------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4MIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 193 -212 -1.10 -2.27
target 2D structure prediction score : 0.27
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -1.10
2D Compatibility (Sec. Struct. Predict.) : 0.27
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.205

(partial model without unconserved sides chains):
PDB file : Tito_4MIE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MIE-query.scw
PDB file : Tito_Scwrl_4MIE.pdb: