Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTPGSVFFDQQFSFHDGESGEKLFVILGWD-------NGIAIVAKTTSQQHGRGTTFGCQPKDRFHNFYLPQNSCYFRKCTWVCLDEFYELNAVEVLQKRFSGLINPVCNLTNEMLRKLQDCALESDDLSGRQESIIRSSLV
5WYG Chain:A ((8-118))PRRGDLWLVS-LG------KHRPAVVVSVDELLTGIDDELVVVVPVSSSRSRTP--------LR---PPVAP-SEGVAADSVAVCRGVRAVARARLV--------ERLGALKPATMRAIENALTLILGLP------------


General information:
TITO was launched using:
RESULT:

Template: 5WYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 472 -25331 -53.67 -263.86
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -53.67
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_5WYG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5WYG-query.scw
PDB file : Tito_Scwrl_5WYG.pdb: