Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHLNSSIDKKMTTLNILFKTTSLCLAMALLVGCNDNDDNDSSTPAPRSNQTVNILAFNDFHGNLEPPKRYVEAANPNDASQTVRIPVGGVSYFADAIKKLKAQNPNNVVVSAGDLISASPLTSSLFLDEPTIEVMNDIQIDFNAVGNHEFDRGTDELRRLQNGGCQQYTSTAPCQINKNFSGAKFNFLAANVAMKNDTSKTI---FPAYKVKTYGGIPVAFIGLTLKATPSIVSAAGIKDVEFRDEADTVNALIPELQKQGIEAIVVVVHEGAAPSTKLNQKTCDGLSGPILG---ILDRLNPAVDIVVSGHTHQSYICDYATKNPAKPFLLTSAGQYGTLITDIKVGLDGKTGDIIKKDAKQIPVQSEAYTSGTTTVSLTDLYQKFSKTPSIEAILDKYRQAVTTISGRVVGTSTAVV--SRTQVESGESPLGDMIADAQQAAALQASNQ----GSDFTLMNPGGVRADLLINSSNQITFGDIFAVQPFGNSIVTLSLTGKQIRDVLEQQWSGANANSPRILQPSKELSYQYAANTSVSPRASNIMVAGS--------PLVDTKVYRVTVNSFLADGGDNFTVLKEGQNRV-GGGQDIDALESYVAQNSKDSPLIIPATT-RIKVIK
4H1Y Chain:P ((23-544))---------------------------------------------P---WELTILHTNDVHSRLEQTSE--DSSKCVDASRCM----GGVARLFTKVQQIRRAEPNVLLLDAGDQYQGT-IWFTVYKGAEVAHFMNALRYDAMALGNHEFDNGVEGL------------------IEPLLKEAKFPILSANISASGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKETP-FLSNPGTNLV-FEDEITALQPEVDKLKTLNVNKIIALGHSGFEMDKLIAQKVRGVDVVVGGHSNTFLYTGNPPSKEVPAGKYPFIVTSDDGRKVP-----VVQAYAFGKYLGYLKIEFDER-GNVISSHGNPILLDS-----------------SIPEDPSIKADINKWRIKLDDYSTQELGKTIVYLDGSSQSCRFRECNMGNLICDAMINNNLRHADEMFWNHVSMCILNGGGIRSPIDERNDGTITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYGQSTGEFLQVGG-IHVVYDLSRKPGDRVVKLDVLCTSCRVPSYDPLKMDEVYKVILPNFLANGGDGFQMIKDELLRHDSGDQDINVVSTYISKMK----VIYPAVEGRIK---


General information:
TITO was launched using:
RESULT:

Template: 4H1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain P - contact count / total energy / energy per contact / energy per residue : 3012 46727 15.51 93.45
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain P : 0.72

3D Compatibility (PKB) : 15.51
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.374

(partial model without unconserved sides chains):
PDB file : Tito_4H1Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H1Y-query.scw
PDB file : Tito_Scwrl_4H1Y.pdb: