Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMYAVIQSGGKQHRVVEGETLKVELLKAESGATITFDDVLMVVNGDNIQIGAPVVAGAKVTAEVIGHGRHDKIRIIKMRRRKHYRKQQGHRQWFTELKITGISG
5GAG Chain:S ((1-102))MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS-


General information:
TITO was launched using:
RESULT:

Template: 5GAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain S - contact count / total energy / energy per contact / energy per residue : 396 -41072 -103.72 -402.66
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain S : 0.92

3D Compatibility (PKB) : -103.72
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.92
QMean score : 0.611

(partial model without unconserved sides chains):
PDB file : Tito_5GAG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAG-query.scw
PDB file : Tito_Scwrl_5GAG.pdb: