Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKMK-CPNCGKKFAYEEVNNVVEHNDKEMPVVCPYCRTEAARIVTHGYFITEKIEDFLK--
4BMJ Chain:A ((4-65))MDVHKKCPLCELMFPPNYDQSKFEEHVESHWKVCPMCSEQFPPDYDQQVFERHVQTHFDQNV


General information:
TITO was launched using:
RESULT:

Template: 4BMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 129 -262 -2.03 -4.43
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -2.03
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.246

(partial model without unconserved sides chains):
PDB file : Tito_4BMJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BMJ-query.scw
PDB file : Tito_Scwrl_4BMJ.pdb: