Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSASGISGSACGSRHNRPRVFCVVCGSCSEHLILRKSGLKCASCVGKSSNKHYAKLQKRQAKKLFSNAFPAQSPTAGLDTASSVQPGDCSQTNRLFSSASSSLPPAVEDYSGTAGVSTERSSTLHPIEEYISGTSVYRAVMEQACYSGENDRSGGEGGSGDRQTLMSGADGVTRSTSDALSKAHQENTASGSHTNVSSSAAAGDNAGDMRRTSPPLMTQRQESGDAQCSDPGSAKSGRDGVGKTPLCRDSSLIPPTPILDKVTEKEANNQAPARCYKTAPSRLPPRHGPRVTKGTPRLPPSAVDVSRVSAAHTVSAKSNGKATGTSSLNGATASPPSSAIKAVPAAARCVEGQDLMPESGNSVLRDATLPPAEPAAGQHHSHPSTPRGDEGTTPLAASLSQNPTHPPQVLRASRQSPTTFPDASLGLPAPRAGSCNTSITSSTMERGPASRLPLLHSHADSNAGTQVQRDSQGGTRRLSAAPSTVSTLPNTSVRPVDAPGAAGAGAPSLSRMPNSSGATAAALDNCHSVGSSSRCRHNKRGSRGGSSGDSESSSSSLSDDASAIDSSLPSVVSSATPEAVIGEDGAATSGTGTKKALHGGTNALDVGTKKRTRQVPKSVDSTMEKKGAGGSAGHGLATTPLSGYIDALHITVESVQPPLLNGPETTTFAPCGGDELPQAATSYNDESSTTTGDTHSRCDSIRSGSFRTNDGYQRQVYVVGQSGNFKVTRHIRQCSGSSDVLAGRSSAAVASSASGTLTATRLRGRQQHGSSGDTMGTGAVEVKRISYRIIVKNRCSGEVLLTQERRLYTQIIPALERVKAIAGGELPAVPVKRLPSLRFATEVFTEERRAEVEAFLQAVALSPFYVRHPEVVKLLGLELYVTDAGAAAATGAAAAKGSRGNGADAHRPSKSPRAMHTKSSPSMGVGADIEVTPLARRGAACDSKYLSRHSRDGEAGVRAAAATGRGEAGTGCLTVDALNAYCSLTMGGGGGDTADSRNFCRSQSCSSVQTSCSSVVRRRKLDEVTMEDLEHIQLGNLIGRGTFGSVYLGL-VQTQRGSLMVAVKVMKVGEAVAPSEMESLQRELDVLCAARHKNIIRFLGSSLNTTTRDLRVFTEYVECGTIRSLVDRFGALTMLAIQQYMQQILSGLQYLHSLSIAHRDIKGENILVTKNGRIKLSDFGSSTGAPCKVVAAAESPSKGGSGGSADSAANGGLPVGSPQYMAPEVIHGTVKSFA-AVDIWSLGCVGIEMMDRPIWRESP--STNPFVFLYRISRCGTPPHGLPTDDELAALKAEGKKTECEGFSVYLEFLRSCLRVDPEQRPSAAELLKHPFMTYPYSKHLRWMPPMPATAKPSALKSS
4ZJI Chain:A ((30-292))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IGQGASGTVYTAMDVATGQ---EVAIKQMNL--------KELIINEILVMRENKNPNIVNYLDSYL--VGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGF-----CAQITP--------------------TMVGTPYWMAPEVV--TRKAYGPKVDIWSLGIMAIEMIE----GEPPYLNENPLRALYLIATNGTPE--LQNPEKLSA--------------IFRDFLNRCLEMDVEKRGSAKELLQHQFLK--IAKPLSSLTPLIAAAK-------


General information:
TITO was launched using:
RESULT:

Template: 4ZJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1262 -45962 -36.42 -185.33
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -36.42
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.411

(partial model without unconserved sides chains):
PDB file : Tito_4ZJI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZJI-query.scw
PDB file : Tito_Scwrl_4ZJI.pdb: