Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPGRSCVALVLLAAAVSCAVAQHAPPWTEDCRKSTYPPSGPTYRGAVPWYTINLDLPPYKRWHELMLDKAPVLKVIVNSLKNMINTFVPSGKIMQVVDEKLPGLLGNFPGPFEEEMKGIAAVTDIPLGEIISFNIFYELFTICTSIVAEDKKGHLIHGRNMDFGVFLGWNINNDTWVITEQLKPLTVNLDFQRNNK--------------TVFKA--SSFAGYVGMLTGFKPGLFSLTLNERFSINGGYLGILEWILGKKDVMWIGFLTRTVLENSTSYEEAKNLLTKTKI---------LAPAYFILGGNQSGEGCVITRDRKESLDVYELDAKQGRWYVVQTNYDR----------WKH----------------------------P--FFLDDRRTPAKMCLNRTS---QENISFETMYDVLSTKP----VL------NKLTVYTTLIDVTKGQFETYLRDCPDPCIGW
2HF0 Chain:B ((1-291))----------------------------------------------------------------------------------------------------------------------------------------------CTGVRFSDDEGNTYFGRNLDWSFSYG---------------ET--I-LVTPRGYHYDTVFGAGGKAKPNAVIGVGVVMADRPMYFDCANEHGLAIAGLNFPGY-ASF---VHEPVEGTENVATFEFPLWVARNFDSVDEVEETLRNVTLVSQIVPGQQESLLHWFIG-DGKR-SIVVEQMADGM-HVHH-----D-DVDVLTNQPTFDFHMENLRNYMCVSNEMAEPTSWGKASLTAWGAGVGMHGIPGDVSSPSRFVRVAYTNAHYPQQNDEAANVSRLFHTLGSVQMVDGMAKMGDGQFERTLFTSGYSSKTNTYYMNTY---------


General information:
TITO was launched using:
RESULT:

Template: 2HF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 999 -11461 -11.47 -53.81
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.56

3D Compatibility (PKB) : -11.47
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.353

(partial model without unconserved sides chains):
PDB file : Tito_2HF0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HF0-query.scw
PDB file : Tito_Scwrl_2HF0.pdb: