Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNPRSLEEEKYDMSGARLALILCVTKAREGSEEDLDALEHMFRQLRFESTMKRDPTAEQFQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDG--EMVKLENLFEALNNKNCQALRAKPKVYIIQACRGEQRDPG-ETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEGYIAYRHDQKGSCFIQTLVDVFTKR--KGHILELLTEVTRRMA----EAELVQEGKARKTNPEIQSTLRKRLYLQ
4QU9 Chain:A ((63-275))---------------------------SRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDHSKRSSFVC---VLLSHGEEGIIAGTNGPVDLKKITNFFRG---DRCRSLTGKPKLFIIQACRGTELDCGIE---------------HKIPVEADFLYAYSTAPGYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKKQIPCIVSMLTKELYF-


General information:
TITO was launched using:
RESULT:

Template: 4QU9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 875 -1103 -1.26 -5.71
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -1.26
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.555

(partial model without unconserved sides chains):
PDB file : Tito_4QU9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QU9-query.scw
PDB file : Tito_Scwrl_4QU9.pdb: