Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAFRQALQLAACGLAGGSAAVLFSAVAVGKPRAGGDAEPRPAEPPAWAGGARPGPGVWDPNWDRREPLSLINVRKRNVESGEEELASKLDHYKAKATRHIFLIRHSQYHVDG----SLEKDRTLTPLGREQAELTGLRLASLG-----LKFNKIVHSSMTRAIETTDIISRHLPG-----VCKVSTDLLREGA-------PIEPDPP------------VSHW---KPEAVQYYEDGARIEAAFRNYIHRADAR--QEEDSYEIFICHANVIRYIVCRALQFPPEG--------------------------------WLRLSLNNGSITHLVIRPNG--RVALRTLGDTGFMPPDKITRS
3F3K Chain:B ((2-263))---------------------------------------------------------------------------------------------PSLTPRCIIVRHGQTEWSKSGQYTGLTDLPLTPYGEGQMLRTGESVFRNNQFLNPDNITYIFTSPRLRARQTVDLVLKPLSDEQRAKIRVVVDDDLREWEYGDYEGMLTREIIELRKSRGLDKERPWNIWRDGCENGETTQQIGLRLSRAIARIQNLHRKHQSEGRASDIMVFAHGHALRYFAAIWFGLGVQKKCETIEEIQNVKSYDDDTVPYVKLESYRHLVDNPCFLLDAGGIGVLSYAHHNIDEPALELAGPFVSPPE------


General information:
TITO was launched using:
RESULT:

Template: 3F3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 863 -8464 -9.81 -44.54
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.64

3D Compatibility (PKB) : -9.81
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_3F3K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F3K-query.scw
PDB file : Tito_Scwrl_3F3K.pdb: