Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFLSKNGAGILACLLISILSWYLGGFFPVIGAPVFAIFIGMLLHPFLSS--YKQLDAGLTFSSKKLLQYAVVLLGFGLNISQVFAVGQSSLPVILSTISIALIIAYLFQR-FFALD--TKLATLVGVGSSICGGSAIAATAPVIHAK--EKEVA-QAISVIFFFNVLAALIFPTLGTWLHLSNEGFALFAGTAVNDTSSVTAAASAWDSLYQSNTLESATIVKLTRTLAIIPITLFLSYWQSRQQENKQSLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKQLSKFLIVMAMSAIGLKTNLVAMVKSSGKSILLGAICWIAIILTTLGMQTLIGIF
4D0A Chain:B ((29-175))------------------------------IPDIPLLLLLGLIIGPFLQIIPSDSAMEIFEYAGPIGLIFILLGGAFTMRISLLKRVIKTVVRLDTITFLITLLISGFIFNMVLNLPYTSPVGYLFGA---ITAATDPATLIPVFSRVRTNPEVAITLEAESIFNDPLGIVSTSVILGLF--------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4D0A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 360 -49169 -136.58 -353.73
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.52

3D Compatibility (PKB) : -136.58
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.083

(partial model without unconserved sides chains):
PDB file : Tito_4D0A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D0A-query.scw
PDB file : Tito_Scwrl_4D0A.pdb: