Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFVWYNLFLKKEREVISMRKWTKGFLIFGVVTTVIGFILLFVGIQSDGIKSLLSMSKEPVYDSRTEKLTFGKEVENLEITLHQHTLTITDSFDDQIHISYHPSLSAHHDLITNQNDRTLSLTDKKLSETPFLSSGIGGILHIASSYSSRFEEVILRLPKGRTLKGINISANR-GQTTIIN-ASLENATLNT-NSYILRIEGSRIKNSKLT--TPNIVNIFDTVLTDSQLES-TENHFHAENIQVHGKVELT-AK-DYLRIILDQKESQRINWDISSNYGSIFQFTREKPESRGTELSNPYKTEKTDVKDQLIARSDDNIDLISTPSRR
3JX8 Chain:A ((116-234))-----------------------------------------------------------------------------------------------------------------------------------------------------------------KVNRMEINMAGSGNVELRGPVKGYKLECNMAGSGNIIAKDIQLDNLSCSLASSGEIEVIG-TVDRASFNVAGSGEIKAFDCQA-RKAECNIASSGEISVYATQI----LDANI-VGSGEIHYKGDP-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3JX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 654 21750 33.26 195.94
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : 33.26
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.257

(partial model without unconserved sides chains):
PDB file : Tito_3JX8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JX8-query.scw
PDB file : Tito_Scwrl_3JX8.pdb: