Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKNSIFLLKKRSLKGKESDMRQLAKDINAFLNEVILQAENQHEILIGHCTSEVALTNTQEHILMLLSEESLTNSELARRLNVSQAAVTKAIKSLVKEGM--LETSKDSKDARVIFYQLTDLARPIAEEHHHHHEHTLLTYEQVATQFTPNEQKVIQRFLTALVGEIK
4EJW Chain:A ((10-116))-----------------------------SFLEKFINDVNTLTAKLLKDLQTEYGISAEQSHVLNMLSIEALTVGQITEKQGVNKAAVSRRVKKLLNAELVKL------------IIKLSNKGKKYIKERKAIMSH--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4EJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 287 -25745 -89.70 -276.82
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -89.70
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_4EJW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EJW-query.scw
PDB file : Tito_Scwrl_4EJW.pdb: