Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMLAQLQNRFDQWVEQIVQYLDRLSVRERIMVVFT-TIFVVVVIVGYSLWKMHSLA----------EQQQKRLNDLKDLMVW-MQSNAVTMKPAN----ELEL--------------DKSGKIQRVAQQQGLTVSS-----QQNGEQ---LQIVVTHQNYAILANFLIQLAQMGLSIQKMEMVSSEGQIKLTATV
1JXP Chain:A ((3-179))ITAYSQQTRGLLGCIITSLTGRDKNQVEGEVQVVSTATQSFLATCVNGVCWTVYHGAGSKTLAGPKGPITQMYTNVDQDLVGWQAPPGARSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPVSYLKGSSGGPLLCPSGHAVGIFRAAVCTRGVAKAVDF-VPVESMETTM------------------


General information:
TITO was launched using:
RESULT:

Template: 1JXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 553 -16456 -29.76 -118.39
target 2D structure prediction score : 0.29
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -29.76
2D Compatibility (Sec. Struct. Predict.) : 0.29
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.246

(partial model without unconserved sides chains):
PDB file : Tito_1JXP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JXP-query.scw
PDB file : Tito_Scwrl_1JXP.pdb: