Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKNIRIGSYHWMQTTNGQLSFKEKIKLIQKIMVPSILSSIKINYYRFQTGNDFDIGQIVIPDTQMIKIALEELESKA----SISIYNHSWRTYFWGAALGHLQNQQFDPESLLLASLFHDIGLTEQHMHSKGCQCFTYESAKQFEQKAKEYNFDDKKSEVIKDAICLHMNGYIEDSDPPEVVLLQQGASCDVISDNQYKLPLSFRNKILEKYPRNQFNKEFIKLINLERKNVPNSRTGLLYDLGLPLMIKSNLYNENLI
3DJB Chain:B ((4-142))--------------------------------------------------------------QEKIEKTITFVKHILEKDASGHDWYHIRRVHKMAISLSEQEG--GNRFIIEMAALLHDVAD--LN-------ESEEAGMKKVSDWLEELHVEEEESKHVLHIIANMS---------IEGKLVQDADRLDALGAI---------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DJB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 445 -17368 -39.03 -157.89
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.58

3D Compatibility (PKB) : -39.03
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.411

(partial model without unconserved sides chains):
PDB file : Tito_3DJB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DJB-query.scw
PDB file : Tito_Scwrl_3DJB.pdb: