Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMQTLRASKCGLSTAQLPSSILDVIDSLTKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPSQIKEVFGRRCRIIGR---RFELAHVYSGRELIEVATFR---APPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPR---KGIVLDFCKAIDDVKSKTLRLLGDPVQRFEEDPVRMLRTLRFAAKLNFKIDPAILDIFDVEMTQLLRDVSPHRLYDESQKLFTMGHLARVLPMLIAFGVWKQLFADIRPDLTPFIQRAAKNTDQRIQVGKTINPAFFYAVLLWQPFLERCDFYLSKGVVPAEARAQAGLDVLKRQATRTVIPRFAETFIREVWEMQTRLLNPKPQQIEALASHARFRAGFDFLLLREKSGDDTTQGMGSWWEAYQEMSNDEKEAAISQYNRQKAKSRRKVAAEPVESNKVDTEIEPLVDVPEPRSRRGKKERARQEQSIDRFIEKSSAAQTNVMSDHPILKRKRVQRDLSQVIFGPTQ
4WC2 Chain:A ((10-171))------------------------------GLRAYIVGGVVRDILLGKEVWDVDFVVEGNAIELAKELARRHGVNVHPFPEFGTAHLKIGKLKLEFATARRET-------EPAS-----------LKEDLIRRDFTINAMAISVNLEDYGTLIDYFGGLRDLKDKVIRVL-HPVS-FIEDPVRILRALRFAGRLNFKL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4WC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 603 -13589 -22.54 -97.76
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -22.54
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.413

(partial model without unconserved sides chains):
PDB file : Tito_4WC2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WC2-query.scw
PDB file : Tito_Scwrl_4WC2.pdb: