Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMPKIKPIKLVIIVVCIAIIAVLAWKFLKPKQQQPQYITAEVTRGDIENNVLATGTLDATKLISVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSTTQENSLKTSDANIKNLEAQRLQQVASLNEKQLEYRRQQQMYAQDATPRADLESAEAAYKTAQAQVKALDAQIESAKVTRSTAQTNIGYTRIVAPTDGTVVAIVTEEGQTVNANQSAPTIVKIAKLQNMTIKAQVSEADIMKVEKGQQVYFTTLGDETKRYATLRQIEP----APDSISSESNSTTSSTTSSAVYYNALFDVPNTDGKLRIDMTAQVYIVLNSAKNALLVPSSALSSKQFSGQRKQQGQSADKASSTPSAERKHQGNGARLERLNLTPEQKQLIEQGKATLSVVRVLQADGTTKPTQILVGINNRVNAQVLAGLKQGDQVVIADSSENSAASANSGNNRRRGPMGM
5V5S Chain:D ((58-314))-----------------------------------------------------GRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLA-------KAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARI-------NLAYTKVTSPISGRIGKSNVTEGALVQ-NGQATALATVQQLDPIYVDVTQSSNDFLRLK--QELANGTLKQENGK-AKVSLITSDGIKFPQDGTLEFSDVTVDQTTGCITLRAIF--PNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVT------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5V5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 955 -27258 -28.54 -107.74
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain D : 0.67

3D Compatibility (PKB) : -28.54
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.360

(partial model without unconserved sides chains):
PDB file : Tito_5V5S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5V5S-query.scw
PDB file : Tito_Scwrl_5V5S.pdb: