Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQIYLARNNQQAGPYTLEQLNQMLASQQVLLTDLAWHEGMTEWKALGELTQGKLVYQPTGYSAFSANTNTPYNETIQHIRVETKTHELASISSRALAKIIDLLLWLPIAAIPSFFFNEAQYKQLFELQKQMQSAEVASTKAAELQQQLFTLIPIEAWHTMLLYVVIMLAIQAFLLTKFGQSIGKKIVGIRIVDAENNGKVNLTRIFLLRSVVFIILNLLFMPISTIIDYAFALGQKRQALHDKIARTKVIK
5GHR Chain:B ((41-59))----LGPDMKEYGPFMAGDMAII------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5GHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 19 -982 -51.66 -51.66
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain B : 0.47

3D Compatibility (PKB) : -51.66
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.47
QMean score : 0.616

(partial model without unconserved sides chains):
PDB file : Tito_5GHR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GHR-query.scw
PDB file : Tito_Scwrl_5GHR.pdb: