Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKALPIAVAVVLGGAALVPVYYATQHPTTEVGHKADKNASPIQKISYVLGYEVAQQTPPELDTKAFVQGIHDVRNKQPSAYTQEDLKAAVAAYEKELQQKMQHQDKPEQAGTATDSADAQFLAENKTKAGVKTTASGLQYIITKEGTGKQPTAQSIVKVHYEGRLINGQVFDSSYKRGQPVEFPL--NQVIPGWTEGLQLMKEGGKATFFIPSNLAYGPQELPG-IPANSTLIFDVELISVK
2Y78 Chain:A ((23-133))-----------------------------------------------------------------------------------------------------------------------------------VVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV-


General information:
TITO was launched using:
RESULT:

Template: 2Y78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 532 -12158 -22.85 -112.57
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -22.85
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.678

(partial model without unconserved sides chains):
PDB file : Tito_2Y78.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y78-query.scw
PDB file : Tito_Scwrl_2Y78.pdb: