Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAGNSIGQLFRVTTCGESHGVGLMAIVDGVPPGLALTEEDLQKDLDRRKPGTSKFATQRKEPDQVEIISGVFEGKTTGTPIGLLIRNTDQKS------------KDYGNIAQTF-----RPGHADYTYTQKYGFRDYRGG-GRSSARETAMRVAAGAIAKKYLAEKFGILIRGHVTQIGNEV------AEKLDWNEVPNNPFFCGDVDAVPRFEALVKSLREQGTSCGAKLEILAEKVPVGWGEPVF--DRLDADIAHAMMSINAVKGVEIGDGFAVAGQFGHETRDELT--SHGFL--ANHAGGILGGISSGQTIRVAIALKPTASITTPGKTINLNREDTDVLTKGRHDPCVGVRATPIAEAMLAIVLMDHFLRHRAQNADVVPPFVPIEP
4BAI Chain:A ((2-367))---------LRWITAGESHGRALVAVVEGMVAGVHVTSADIADQLARRRLGY-----------AVTVLSGIRHGSTLGGPIAIEIGNTEWPKWETVMAADPVDPAELADVARNAPLTRPRPGHADYAGMLKYGFDDARPVLERASARETAARVAAGTVARAFLRQALGVEVLSHVISIGASAPYEGPPPRAEDLPAIDASPVRAYDKAAEADMIAQIEAAKKDGDTLGGVVEAVALGLPVGLGSFTSGDHRLDSQLAAAVMGIQAIKGVEIGDGFQTARRRGSRAHDEMYPGPDGVVRSTNRAGGLEGGMTNGQPLRVRAAMKPISTVPRALATVDLATGDEAVAIHQ----CAVPAAGVVVETMVALVLARAAL------------------


General information:
TITO was launched using:
RESULT:

Template: 4BAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1455 -46570 -32.01 -145.08
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -32.01
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_4BAI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BAI-query.scw
PDB file : Tito_Scwrl_4BAI.pdb: