Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------MTRPDSKSMNYQLLKTFSRQPIQFGRFLARLLAGLVNTLKITRTSKSIELNLRIALPYLTP----QQRIAITEKAVRNE----LTSYFEFLSIWGSSNSKNIS---------------------------RIHRIEGEHFFHEALAAKKGV-------VLIVPHF---GTWEVMNAWCAQFTSMTILYKPVKNADADRFVREARSREQANLVPTDE------SGVRQIFKALKQGETTVILPDHTPNVGGDMVNYFGVPL------------ASSNL------SAKLIQKTKAKALFLYAIRN-ENDGFTI-HIEPMDEKIY--------EGTADDGTYVIHQAIEQLIYQYPEHYHWSYKRFKANPALDNIYNIDPTEALKIVDRLKAEALKTSTQPEPIQTSVM------------------------------------------
4K70 Chain:A ((2-483))PGSMEALVRALEEADHAVATVVQSRILEFFMAAGRETPAGVRGLWARALRLACRAYVETGTCEAAVLAENLAGLALWRLRHDWDEGTAPLLELLGVVNGDDTTAALTEAGLRTSAEFGPDAMFRLVSEWCAAFDEALAGARSADDVLAAPRVVPPEQTARALVQPRFATLYDMDFVQDGLRYVAQHTNWALPLALAVRQMQNEGLKPLTRALFALTIADEFFHDRQNPTLREQFAEAARAVDEAALVPVGEVNATPRTAVEVRVSAALAHGDAYVRELRPGTVARRLRTDQGVLALLDPGAQAVHVAAAADLDHTQVDATGVWEAVQASASPLQVVEALVTAGFTRRHCDLLERAVLDRAPRLTDAQRAVGCTAVVGGVVHRLLDDYGPGLDYVRAYTDVADTLEPLYG-DVTAALGLPEKGVEHVVRHCMAPRPPTEHVGAARAALLREVAAAERRAGLAHSAAREALNTWLAFRAQSRWGL


General information:
TITO was launched using:
RESULT:

Template: 4K70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1484 3835 2.58 11.76
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 2.58
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.221

(partial model without unconserved sides chains):
PDB file : Tito_4K70.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K70-query.scw
PDB file : Tito_Scwrl_4K70.pdb: