Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKNQEIVVILGNADKRDWHFILVQLFFQLLGRRD---RLFKTYFRFNKIQDNPFRIMNLMLLIFIV------LWLGYINHDFLISSFSSLGIFTFFYYQNIPM--KYLLKRMFLIGCGLLVAFVLGILSTYVLWLEPFAVALVAFS----------------SRFVL-----------RLFHISKPGGLFFAMLSAMGTSMQLPIAQLPIVSLYFFMGVVFALIAAVITKLLDSRPEQTIEKATLKERFHEEPLVIIDSVFYSAALFLSVYVSHG----LNLHNPYWLTLSCASILLAENLDAMKHRQVQYLIGSMGGLCVSAFLSFVPFTQLQTIFLITFLYGIAQFLVARNYAVANIFL--------NPMALMLSTLIRGAYLISLIEYRFLGIVIGSFIGLG--VAWVMTVGLQHYLTVVRQKLE----------------------------------------------
5LJ3 Chain:S ((37-556))--------ILDLEELREYQRRKRTEYEGYLKRNRLDMGQWIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAISTLPRVDKLWYKYLIVEESLNNVEIVRSLYTKWCS-LEPGVNAWNSFVDFEIRQKNWNGVREIYSKYVMAHPQMQTWLKWVRFENRHGNTEFTRSVYSLAIDTVANLQNLQIWSDMEVAKLVNSFAHWEAAQQEYERSSALYQVAIEKNQLLKAGLLDFEKQFNSIEETISYKRKMDYETILSNYDTWWLYLDLISEFPKQIMQTFEKAIVDSK-NVQWKRYIYLWMRYICYVELESLLEEELFQRLIDDIFSKIWLMYAKFLIRDVPKARKILGKAIGTFKGYIELEVKLEFDRVRKIYEKFIEFQDLQIWSQYGELEENGDWDRVRGIYTIALDEKEAKIVLLQKYITFEARKLYRRYLELNPQSWIEFAMYQT


General information:
TITO was launched using:
RESULT:

Template: 5LJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain S - contact count / total energy / energy per contact / energy per residue : 1249 -100818 -80.72 -275.46
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain S : 0.61

3D Compatibility (PKB) : -80.72
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.229

(partial model without unconserved sides chains):
PDB file : Tito_5LJ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LJ3-query.scw
PDB file : Tito_Scwrl_5LJ3.pdb: