Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKKEIVLTAAMMLFSMVASTTFVSATEVYPKEYNTEGTITFEAGDEGVTPPVDPENPDPNK---PVDPSDPPSPG-TGGALSIDYGSKFKFGTQKISTADKTYYAAADVMNDGSRKPTYVQVTDRRSTLSGWKLSVSQPEQFKTASGDELVGAQLKFTKGQAVSLVDPTYTPQTVNSELTLTPGGNNTLAINAKSGTGVGTWVYRFGANENENQDAVQLSVPGKSVKLAQQYSTKLVWTLEDTPNN
1G9J Chain:A ((113-195))------------------------------------------------------PEFQDPSKYPSPLDTSQPVGRDPINSQLTSAYGTSMLYGMHWILDVDNWYGFGARA--DGTSKPSYINTFQRGEQESTWE-TIPQP-----------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1G9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 151 16998 112.57 215.16
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 112.57
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.277

(partial model without unconserved sides chains):
PDB file : Tito_1G9J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1G9J-query.scw
PDB file : Tito_Scwrl_1G9J.pdb: