Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAIRKECCLM---KFFQEFFIIIFFSVLGEGIRIFAHL-----------PIPGSILGILFLFL--AFEMHLVDPEKIG---ATGDFLLNNLAILFVPAGVGLLEYFDDIASIW---PVLLGAVVVCSIVTMVAAGKTAEGVEAL-LGYVRKKKAERVSVNEMEENQID---------------------------------------
4D10 Chain:G ((12-219))TGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVAN


General information:
TITO was launched using:
RESULT:

Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 560 -22824 -40.76 -156.33
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain G : 0.65

3D Compatibility (PKB) : -40.76
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.266

(partial model without unconserved sides chains):
PDB file : Tito_4D10.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D10-query.scw
PDB file : Tito_Scwrl_4D10.pdb: