Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLPFFIYWGVILACIAWLALSVYFSVFYLVRKENGNLWAFALFNVIAAIVLAITLAVYRTWGWGITQYSSLIYLILAIYG-VVVLLQAILGREPKKAAA-------------------------------------------------------
5J5L Chain:A ((1-152))MDAATILSDLSTIKTDINTLTQHFNEF--TGDLLQALAAQAVEQQLESDIDQATADAKATSALSAADSTSVTNALLGLKPDIVTSLDAIVAKKPQVDSAGVGSLVLSDLNALQSKTDALSGALQDIATATDKDTIASGTQDIDAAFSSAIAVFS


General information:
TITO was launched using:
RESULT:

Template: 5J5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 244 -41121 -168.53 -428.34
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -168.53
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.361

(partial model without unconserved sides chains):
PDB file : Tito_5J5L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5J5L-query.scw
PDB file : Tito_Scwrl_5J5L.pdb: