Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISIIWFLFFFIFFSYLKVIKIDSFLVYHTSAMKNLTQNLLKKDNSSILKIELKKENNKSMKISKKAFLLVVLILLSTLYSVNFMRNAQEIYTTGDLSFHLSRIKGLSSIFEGPINYTTFNNYGDGLNYFYPFLTIIPAVVFYGISNNLILSYVLYIWLLNICTILISFWERQ
3NQZ Chain:B ((94-136))---------------------------------------------------------------------------------------------TAPLSFQLQMRVHYSSNYENAFWDGSAMTFGDGQNTFYPLVSL-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3NQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 127 -4600 -36.22 -106.97
target 2D structure prediction score : 0.21
Monomeric hydrophicity matching model chain B : 0.45

3D Compatibility (PKB) : -36.22
2D Compatibility (Sec. Struct. Predict.) : 0.21
1D Compatibility (Hydrophobicity) : 0.45
QMean score : -0.051

(partial model without unconserved sides chains):
PDB file : Tito_3NQZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NQZ-query.scw
PDB file : Tito_Scwrl_3NQZ.pdb: