Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYFLFALLTFFPLQVAEISTFYYVSGTIYLKSEGDHFYENKNN
2LNY Chain:A ((1-20))---------------------MAAVAGLYGLGE--DRQHRKKQ-


General information:
TITO was launched using:
RESULT:

Template: 2LNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 20 -2141 -107.03 -107.03
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -107.03
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.225

(partial model without unconserved sides chains):
PDB file : Tito_2LNY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LNY-query.scw
PDB file : Tito_Scwrl_2LNY.pdb: