Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMKKRSVKQLGLGLISLGILGGLAACGNGNSSAEGEADEGKTLTVSVDSGYKDYINEIKNTFEKENDVKIKLVEKDMFDQLESLALDGPAGKGPDVMMAAYDRIGALGQQGHLAEV---KLGNEAAYDETDKAQVTYDGKIYGEPAVIETLVLYYNKDLVDTAPSTFKDLENLSKDSRFAFESEAGKNTGFLAKWTDFYYSYGLIAGYGGYVFG-DDGT-NPSDIGLNNAGAVEGISYATDWFKNVWPKGMQDIKSAGDF--ASQQFMSNKTAAIIDGPWQAQTYKENNINYGVAKIPTLNNGQPYQPFGGGKGWVVSNYAKNKDLSQKWLD-YVTNQENQEKFFEMVNE------IPANQQARETAKAKNDELTTAVIEQYETAQAMPNIPEMGEVWTGAENLMFDAASGSKTPKESADEAVKTISEAIEQKY
3WOA Chain:A ((29-412))---------ELGLSQESVADKMGMGQSGSGMKIEEGKL----VIWINGDKGY-NGLAEVGKKFEKDTGIKVTVEHPDKLE--EKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDA-VRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDK------ELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKN------KHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTF-KGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEG----LEAVNKDKPLGAVALKSYEEELAK---DPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASG----RQTVDEALK----------


General information:
TITO was launched using:
RESULT:

Template: 3WOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2016 35006 17.36 94.61
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 17.36
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_3WOA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WOA-query.scw
PDB file : Tito_Scwrl_3WOA.pdb: