Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKMKKYKIRKSGNSDVTTIPPEVKEFMGVQTGDAISYVFQSDGSVRMIKAQEEPDIDSLVDSIMNQYEDALKDLVDL
3ZVK Chain:G ((2-43))----NKAKIFMNGQSQAVRLPKEF----RF-SVKEVSVIPL-GKGIVLQPLP--------------------------


General information:
TITO was launched using:
RESULT:

Template: 3ZVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 69 -12378 -179.38 -294.70
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain G : 0.63

3D Compatibility (PKB) : -179.38
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.656

(partial model without unconserved sides chains):
PDB file : Tito_3ZVK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZVK-query.scw
PDB file : Tito_Scwrl_3ZVK.pdb: