Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKETRQFIWTYIKIIFALFILGVAINMFLGPHHIAAGGVSGLGILLEAALGFDRAIVILVLNIVMLVLALLFLGKKPFFKVLFGSLVFPLIIAIVPETMITSDRLLSVIFGSAIFALGVAILYKNNSSSGGTTIPPLIFKKYFHLNTSIGLFFTDAFVVSLNLFVFGIEEFLYAILSIAITSIVMTYIETGINRKKSVMVMSEHY-LEDIRLRLSAEIG-RGLTLLEAKGGYNR---KSKEVLLIVVTDHEFSRMKPLIEEID-----PSAFVIVSSVAEVMGRGFTYHPIE
3T9Z Chain:B ((4-103))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVAVIRPEKLECVKKALEE-RGFVGMTVTEVKGRG--VDLLQKTKVEVVVSDDAVDEVVEAIVSSARTGKFGDGRIFVIPVEKSVKIR-------


General information:
TITO was launched using:
RESULT:

Template: 3T9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 295 -3160 -10.71 -42.13
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.43

3D Compatibility (PKB) : -10.71
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.43
QMean score : 0.403

(partial model without unconserved sides chains):
PDB file : Tito_3T9Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3T9Z-query.scw
PDB file : Tito_Scwrl_3T9Z.pdb: