Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKGGQMKKVMFAGLSLLSLVVLMACGEEETKKTQAAQQPKQQTTVQQISVGKDVPDFTLQSMDGKEVKLSDFKGKKVYLKFWASWCGPCKKSMPELMELAAKPDRDFEILTVIAPGIQGEKTVEQFPQWFQEQGYKDIPVLYDTKATTFQAYQIRSIPTEYLIDSQGKIGKIQFGAISNADAEAAFKEMN
5UM7 Chain:B ((46-186))----------------------------------------------EHELTGQQLPEFEMVDQAGYQKKSAEFYNKPMLVVEWASWCPDCQKQLPEIQKVYEKYKGKIHFVMLDMLDSK-RETKERADQYISEKDY-TFPYYYDTDERAADILHVQSIPTIYLVDKNQKVKKVMTDFHDEAALEKQLEE--


General information:
TITO was launched using:
RESULT:

Template: 5UM7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 674 -60350 -89.54 -428.01
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : -89.54
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_5UM7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UM7-query.scw
PDB file : Tito_Scwrl_5UM7.pdb: