Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MAKEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLARRLPSSVNQPKDYASIDAAPEERERGITINTAHVEY-----------------------ETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDG-PMPQTREHILLSRQVGVKHLIVFMNKVDLVDDEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYEDIVMELMNTVDEYIPEPERDTDKPLLLPVEDVFSIT----GRGTVASGRIDRGIVKVNDEIEIVGIKEE---------TQKAVVTGVEMFRKQLDEGLAGDNVGVLLR---GVQRDEIERGQVIAKPGSI-NPHTKFKGEVYILTKEEGGR----HTPFFNNYRPQFYFRTTDVTGSIELPAGTEMVMPGDNVTIDVELIHPIAVEQGTTFSIRE----GGRTVGSGMVTEIEA 1KK1 Chain:A ((6-410)) -------SRQAEVNIGMVGHVDHGKTTLTKALTGVWTD------------------SEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEK-ALENYRQIKEFIEGTVA--ENAPIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGKLVGGVLDGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVV--EQELKVEPIKRKEVLLLNVGTARTMGLVTGL---------GKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE---

General information: TITO was launched using: RESULT: Template: 1KK1.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1861 59181 31.80 170.06 target 2D structure prediction score : 0.61 Monomeric hydrophicity matching model chain A : 0.72 3D Compatibility (PKB) : 31.80 2D Compatibility (Sec. Struct. Predict.) : 0.61 1D Compatibility (Hydrophobicity) : 0.72 QMean score : 0.449

(partial model without unconserved sides chains): PDB file : Tito_1KK1.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1KK1-query.scw PDB file : Tito_Scwrl_1KK1.pdb: