Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTETLIKIENLHKSFGKNEVLKGINLEIKRGEVVVIIGPSGSGKSTLLRSMNLLEEATKGKVIFEGVDITDKKNDLFAMREKMGMVFQQFNLFPNMTVMENITLSPIKTKGESREVAEKRA------QELLEKVGLPDKADAYPQSLSGGQQQRIAIARGLAMEPDVLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMADGVVVEDGTPEQIFEQTQEQRTKDFLRKVL
1XEF Chain:A ((18-227))-------------------ILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALA--DPNWLRRQVGVVLQD-NVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELRE--GYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICK-GRTVIIIAARLSTVKN-ADRIIVMEKGKIVEQGKHKELLSE--------------


General information:
TITO was launched using:
RESULT:

Template: 1XEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 963 -24661 -25.61 -120.89
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -25.61
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.465

(partial model without unconserved sides chains):
PDB file : Tito_1XEF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XEF-query.scw
PDB file : Tito_Scwrl_1XEF.pdb: