Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDSEGFRPNVGIILAN---DDGQVLWAKRIG---HNAWQFPQGGIQF--GETPEQALFRELREEIGLLPEHVQIIAQTKGWLRYRLPHRYIRSDSDPVCIGQKQKWFLLKLTAPAKNIQLNLADPPEFDEWQWVSYWYPLGQVVNF-KRDVYRKAMVELCTQLPVQQLP
3GZ5 Chain:A ((21-169))------QLLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQLCTVGNN------SRDARG-------WSVTVCYTALMSYQAC--QIQ---IASVSDVKWWPLADVLQMPLAFDHLQLIEQARERLTQKALYSLV-


General information:
TITO was launched using:
RESULT:

Template: 3GZ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 656 -5393 -8.22 -39.65
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -8.22
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.342

(partial model without unconserved sides chains):
PDB file : Tito_3GZ5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GZ5-query.scw
PDB file : Tito_Scwrl_3GZ5.pdb: