Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQRIAINGFGRIGRNVLRAWFESPKQFHFEIVAINDIADVNTLVHLFKYDSTHGRFNGKVDITIENEKIYLNIQSNQRLLKVEVLQQKQPELLPWASLKIDVVLECTGLFRSHADATRHLEAGAKRVIIGAAPFDHVDAAIVYGVNHADVKAT-DQIISSVSCTTQALVPLVKIIDDAFGIETALMTEIHAVTADQSVLDHAHRDLRRARASGQNIIPTTSSALGALKRVMPKMENRIDGYSIRVPTINVAAIDLTFIAQSPITVHHINELLIKASQTDYAEIMAVTDEPLVSSDFNHSPYSLIVDSTQTMVVG-HQAKVFAWYDNEWGYANRLLDLCDSF
4DIB Chain:A ((4-332))MTRVAINGFGRIGRMVFRQAIKE---SAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEAF--EDHLLVDG------KMIRLLNNRDPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNE-DVTIVVGVNEDQLDITKHTVISNASCTTNCLAPVVKVLDEQFGIENGLMTTVHAY-------------LRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPNVSLVDLVVDVKRDVTVEAINDAFKTVANGALKGIVEFSEEPLVSIDFNTNTHSAIIDGLSTMVMGDRKVKVLAWYDNEWGYSRRVVDLVTLV


General information:
TITO was launched using:
RESULT:

Template: 4DIB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1831 -153865 -84.03 -490.02
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -84.03
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_4DIB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DIB-query.scw
PDB file : Tito_Scwrl_4DIB.pdb: