Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDSEGFRPNVGIILANDDGQVLWAKRIGHNAWQFPQGGIQFGETPEQALFRELREEIGLLPEHVQIIAQTKGWLRYRLPHRYIRSDSDPVCIGQKQKWFLLKLTAPAKNIQLNLADPPEFDEWQWVSYWYPLGQVVNF-KRDVYRKAMVELCTQLPVQQLP
4HFQ Chain:B ((68-195))------PLMDVRAWIVE-DEKICLVRGQGEDSWALPGGFGEVGYSPTENILKEIEEETGFKAKVERLLAVFDTNRFQ-LQ-----------SKQYTKFVFGCKLLDGQ--FQ----ENQEIADLQFFAIDQLPNLSEKRITKEQIELLWQVYQ---------


General information:
TITO was launched using:
RESULT:

Template: 4HFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 638 -48436 -75.92 -381.38
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -75.92
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.456

(partial model without unconserved sides chains):
PDB file : Tito_4HFQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HFQ-query.scw
PDB file : Tito_Scwrl_4HFQ.pdb: