Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRKMPKPIVDVAIAILIHRGKILVGWRGEQQHQGGKHEFPGGKVEQGETPEEACRREIYEEVGIGLKDWHQFDYIHHEYDDIIVNLHLFHSYVPDELLNLIHQPWTWYTREQLLHLNFPKANKDIIKRLYWPHFIKISHTLT-S----------VANSDALLYWRIEDEFGP---REVEQLTALV----EGQRSNLIINVDIWQQLNSELKKQIKTVHLKQSQLMSLHKGDLEVGIRFIAACHDAVSLQHAQQIGCDAVFVSPVKVTATHPDVS-ALGWDRFADLIE-KCQIPVFALGGMSPDDLATAQQRGAYGLAGIRNF
1G6C Chain:B ((15-203))---------------------------------------------------------------------------------------------------------------------------------KELLSVYFIMGSNNTKADPVTVVQKALKGGATLYQFREKG-GDALTGEARIKFAEKAQAACREAGVPFIVNDDV--ELAL--NLKADGIHIGQEDANAKEVRAAIGDMILGVAAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAI


General information:
TITO was launched using:
RESULT:

Template: 1G6C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 786 -3024 -3.85 -17.89
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : -3.85
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.584

(partial model without unconserved sides chains):
PDB file : Tito_1G6C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1G6C-query.scw
PDB file : Tito_Scwrl_1G6C.pdb: