Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRDIIKLDQIDVTFHQKKRTITAVKDVTIHIQEGDIYGIVGYSGAGKSTLVRVINLLQKPSAGKITIDDDVIFDGKVTLTAEQLRRKRQDIGMIFQHFNLMSQKTAEENVAFALKHSGLSKEEKKAKVAKLLDLVGLADRAENYPSQLSGGQKQRVAIARALANDPKILISDESTSALDPKTTKQILALLQDLNQKLGLTVVLITHEMQIVKDIANRVAVMQDGHLIEEGSVLEIFSNPKQPLTQDFISTATGIDEAM----VKIEKQEIVEHLSENSLLVQLKYAGASTDEPLLN----ELYKHYQVMANILYGNIEILDGTPVG-ELVVVLSGEKAALAGAQEAIRQAGVQLKVLKGVQ
1OXS Chain:C ((1-352))MVR--IIVKNVSKVF--KKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDR----KIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK--


General information:
TITO was launched using:
RESULT:

Template: 1OXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1802 -154278 -85.61 -449.79
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain C : 0.77

3D Compatibility (PKB) : -85.61
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.362

(partial model without unconserved sides chains):
PDB file : Tito_1OXS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OXS-query.scw
PDB file : Tito_Scwrl_1OXS.pdb: