Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIHIAAQQGEIADKILLPGDPLRAKFIAENFLGDAV-CFNEVRNMFGYTGTYKGHRVSVMGTGMGMPSISIYARELIVDYGVKKLIRVGTAGSLNEEVHVRELVLAQAAATNSNIVRNDWPQYDFPQIASFDLLDKAYHIAKELGMTTHVGNVLSSDVFYSNYFEKNIELGKWGVKAVEMEAAALYYLAAQYHVDALAIMTISDSLVNPDEDTTA-EERQNTFTDMMKVGLETLIAE
4TYM Chain:A ((24-258))-SIHIEAKQGEIADKILLPGDPLRAKFIAENF-LEDAVCFNTVRNMFGYTGTYKGHRVSVMGTGMGMPSISIYARELIVDYGVKTLIRVGTAGAINPDIHVRELVLAQAAATNSNIIRNDWPEFDFPQIADFKLLDKAYHIAKEMDITTHVGSVLSSDVFYSNQPDRNMALGKLGVHAIEMEAAALYYLAAQHNVNALAMMTISDNLNNPE-EDTSAEERQTTFTDMMKVGLETLISE


General information:
TITO was launched using:
RESULT:

Template: 4TYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1350 -70823 -52.46 -303.96
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.94

3D Compatibility (PKB) : -52.46
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.94
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_4TYM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TYM-query.scw
PDB file : Tito_Scwrl_4TYM.pdb: