Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIYAGILAGGTGTRMGISNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDKYLPLYKERIIITKGGADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDAVDTVVEAVDTIVESTNGQFITDIPNRAHLYQGQTPQTFRCKDFMDLYGSLSDEEKEILTDACKIFVIK-GKDVALAKGEYSNLKITTVTDLKIAKSMIEKD
5DDT Chain:B ((2-225))SYDVVIPAAGQGKRMKA-GRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQEREHFQQLLSDY-PFQTS-IELVAGGDERQHSVYKGLKAVK------QEKIVLVHDGARPFIKHEQIDELIAEAEQTGAAILAVPVKDTIKRVQ-DLQVSETIERSSLWAVQTPQAFRLSLLMKAHAEAE-RKGFLGTDDASLVEQMEGGSVRVVEGSYTNIKLTTPDDLTSAEAIMES-


General information:
TITO was launched using:
RESULT:

Template: 5DDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1155 -102832 -89.03 -461.13
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -89.03
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_5DDT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DDT-query.scw
PDB file : Tito_Scwrl_5DDT.pdb: