Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLINTEVKPFQATAYHNGQFIEVNETNLKGKWSVVFFYPADFTFVCPTELEDLADNYAEFQKLGVEIYGVSTDTHFTHKAWHDT---SDAIKKIQYPLIGDPTWTLSKNFDVLIESEGLADRGTFVIDPEGKIQIVEINAGGIGRDASELLRKVKAAQYVHSHPGEVCPAKWKEGEATLAPSIDLVGKI
3QPM Chain:D ((50-233))---ISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQYTDKH-GEVCPAGWKPGSDTIIP--DPSGKL


General information:
TITO was launched using:
RESULT:

Template: 3QPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 816 -38222 -46.84 -211.17
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain D : 0.79

3D Compatibility (PKB) : -46.84
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.620

(partial model without unconserved sides chains):
PDB file : Tito_3QPM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QPM-query.scw
PDB file : Tito_Scwrl_3QPM.pdb: