Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEICPRTR
5V6D Chain:M ((9-149))MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTLKEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPTEAAEGTIRADFATSVSINAVHGSDSVENAALEIAYFFSQTEICPR--


General information:
TITO was launched using:
RESULT:

Template: 5V6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain M - contact count / total energy / energy per contact / energy per residue : 672 -60361 -89.82 -428.09
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain M : 0.91

3D Compatibility (PKB) : -89.82
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_5V6D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5V6D-query.scw
PDB file : Tito_Scwrl_5V6D.pdb: