Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLVTAIVKPFKLDDVREALSDIGVQGITVTEVKGFGRQKGHTELYRGAEY-VVDFLPKVKIEIAISDEMVDAVIESITRVASTGKIGDGKIFLTNLEQVIRIRTGETGPDAV
2RD5 Chain:D ((13-125))FYKVEAIVRPWRIQQVSSALLKIGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVKKDQVESVINTIIEGARTGEIGDGKIFVLPVSDVIRVRTGERGEKAE


General information:
TITO was launched using:
RESULT:

Template: 2RD5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 426 -27142 -63.71 -242.33
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain D : 0.85

3D Compatibility (PKB) : -63.71
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_2RD5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RD5-query.scw
PDB file : Tito_Scwrl_2RD5.pdb: