Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEANMKHLKTFYKKWFQLLVVIVISFFSGALGSFSITQLTQKSSVNNSNNNSTITQTAYKNENSTTQAVNKVKDAVVSVITYSANRQNSVFGNDDTDTDSQRISSEGSGVIYKKNDKEAYIVTNNHVINGASKVDIRLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKLTVGETAIAIGSPLG-SEYANT--VTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAINPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDI-RRLNIPSNVTSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLNKSSGDLES
3PV3 Chain:A ((73-347))----------------------------------------------------------------------------------------------------RKFESIGSGVIIDPNN--GVIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKIDAKNLKSLV-IGDSDKLEVGDFVVAIGNPFGLN----SQSATFGIVSALKRS-D------ENF----IQTDAAINPGNAGGALVNAKGELIGINTAILS-----V--GIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHL----TPELAQAMGYPEDF-QGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLS------------


General information:
TITO was launched using:
RESULT:

Template: 3PV3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1347 -12424 -9.22 -48.72
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -9.22
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.587

(partial model without unconserved sides chains):
PDB file : Tito_3PV3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PV3-query.scw
PDB file : Tito_Scwrl_3PV3.pdb: