Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQEEPSPSWSMRGLRKWLGTAPETRDELLKLVQNSRRFLEPDTVAMLEGVLDLPATKIREVMTPRTAMISMQEDDQLLD--ILHVLVESAHSRFPVFSADQPDNVVGILLAKDLLPFLTEPNTKLD-IGSLMRQPL-FVPESARSDQVLRMLKHTQTHIAIVI--------DEYGSTAGLVTLEDILEEIV-GEIEDEHDTADEDAQYIVPDNDHTIANAWMVQALTPIEHFNTVLDADFSDDEVETVGGLLLQEIGLVSDLQGQTVELGNWLFTIVEADARTIHLIRAVRQ
5TSR Chain:B ((5-149))---------------------------------------------MIQGVLELRCRTVEDVLTPLEDCF-MLDASTVLDFGVLASIMQSGHTRIPVYEEER-SNIVDMLYLKDLAFVDPEDCTPLSTITRFYNHPLHFVFNDTKLDAVLEEFKRGKSHLAIVQKVNNEGEGDPFYEVLGLVTLEDVIEEIIR----------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5TSR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 480 -27833 -57.99 -210.86
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -57.99
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.368

(partial model without unconserved sides chains):
PDB file : Tito_5TSR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TSR-query.scw
PDB file : Tito_Scwrl_5TSR.pdb: